New opportunity

Senior Manager, AI/ML Engineering

Inari Agriculture, Inc. · Cambridge, United States of America

About this role

Inari seeks a hands-on AI/ML leader in Cambridge, MA, to direct the team building predictive-design systems for sustainable agriculture. The role owns the roadmap for production machine-learning systems that provide genomic, phenotypic and multi-omic predictions to scientists, alongside developing agentic systems. The manager balances reliable delivery with exploration of new approaches to improving crop traits.

Responsibilities

  • Set the AI Team’s technical direction and standards; own the delivery, quality and operability of its work. Decide when to build or adopt foundation models, agentic systems and third-party platforms.
  • Define model evaluation and validation against experimental and field outcomes. Partner with computational biologists, crop biologists, data engineers, software engineers and crop scientists on modeling programs using heterogeneous biological data.
  • Deliver applied AI solutions, including generative AI, RAG, agents and foundation models. Manage and mentor ML engineers, oversee focused contractor engagements, contribute hands-on technical work and represent the team in Data & AI strategy discussions.

Required qualifications

  • MS or PhD in Computer Science, Engineering, Computational Biology or a related field, or a BS with equivalent experience; at least 7 years in ML, AI or related technical roles, including production models and ML pipelines.
  • Advanced Python and scientific-stack skills; experience training and deploying neural networks with PyTorch and/or TensorFlow. Ability to deploy, maintain and monitor models and pipelines at scale using AWS, SageMaker, Docker, MLflow and Airflow or equivalents.
  • End-to-end modeling-roadmap ownership, technical team leadership, practical knowledge of foundation models, RAG and agentic workflows, and clear communication across scientific, engineering and leadership groups.

Preferred qualifications include life-sciences, biotech or AgTech experience; familiarity with genomics, transcriptomics and proteomics; ML for trait prediction, functional genomics or network-based modeling; model training and fine-tuning tied to business impact; and production RAG, agentic or model-serving systems, MCP integrations or AWS Bedrock AgentCore.

The posted salary range is $169,800–$233,400. Compensation also includes short-term incentives, long-term equity and a one-time new-hire stock option grant. Benefits include health, vision and dental coverage, spending accounts, wellness programs, a matching 401(k) and flexible paid time off. Sponsorship is available for certain qualifying roles, but not for H-1B candidates whose employment would require the specified $100,000 fee.

For full details about this role, click “Apply on company site” to view the employer’s original posting.

Skills for this role

Machine LearningPythonPyTorchTensorFlowNeural NetworksAWSAmazon SageMakerDockerMLflowAirflowFoundation ModelsRetrieval-Augmented GenerationAI AgentsGenerative AIModel EvaluationMLOpsTechnical LeadershipCross-Functional CommunicationGenomicsTranscriptomicsProteomicsTrait PredictionFunctional GenomicsModel Fine-TuningModel ServingModel Context ProtocolAWS Bedrock AgentCore

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A focused preparation guide, built around this job’s responsibilities and requirements.

✦ AI-generated guide
Preparation suggestions, not the employer’s actual interview questions. Always check the original posting for current requirements.
01

Understand the role

What matters most

  • Own the predictive-design roadmap

    The role owns ML systems that deliver genomic, phenotypic and multi-omic predictions to scientists, from problem framing through evaluation and delivery.

  • Make predictions trustworthy

    Define model evaluation and validation against experimental and field outcomes, working with computational and crop biologists to interpret heterogeneous biological data.

  • Ship operable ML systems

    Set technical standards and remain accountable for delivery, quality and operability, including deployment, maintenance and monitoring of production models and pipelines.

  • Apply modern AI selectively

    Drive useful agentic, generative AI, RAG and foundation-model solutions while deciding when to build versus adopt models or third-party platforms.

  • Lead across technical and scientific teams

    Manage and develop ML engineers, oversee focused contractor work, contribute hands-on where it matters most and represent the AI Team in Data & AI strategy discussions.

Likely challenges to think through

  • Protect exploration without delaying delivery

    A likely trade-off, not a reported problem: production-ready workflows need dependable delivery while new approaches to crop-trait modeling need room to be tested. Prepare a way to prioritize experiments, set decision points and promote promising work into production.

  • Connect model scores to scientific outcomes

    A likely difficulty is that performance on heterogeneous biological data may not establish value against experimental or field outcomes. Prepare to explain how you would agree on validation criteria with scientists and communicate uncertainty before predictions inform decisions.

  • Choose where modern AI earns its complexity

    Build-versus-adopt decisions for foundation models, agents and platforms may pit speed against control, fit and operability. Prepare a comparison framework tied to scientific or business outcomes, including reasons not to use an agentic approach.

  • Stay hands-on while scaling the team

    Technical contribution can compete with mentoring, contractor oversight and cross-functional leadership. Prepare an example of how you would reserve hands-on work for high-impact problems while delegating delivery and maintaining clear standards.

03

Practice your answers

Technical practice

How would you frame a crop-trait prediction problem using genomic, phenotypic and multi-omic data?

What to coverThe role involves predictions for scientists and modeling with computational and crop biologists. Preparation suggestion: explain how you would define the biological question, prediction target and usable data with those partners before choosing a model.

How would you validate a model against experimental and field outcomes?

What to coverThe posting makes validation against those outcomes central to scientists' trust. Preparation suggestion: discuss baselines, data splits that reflect the intended use, uncertainty and what you would do when field results disagree with model predictions.

How would you train and assess a neural network for a biological prediction task?

What to coverThe role calls for hands-on Python and scientific-stack work, including training and deploying networks with PyTorch or TensorFlow. Preparation suggestion: describe a reproducible training approach, comparisons with simpler baselines and checks for overfitting before deployment.

How would you design an operable production ML pipeline?

What to coverThe posting requires deploying, maintaining and monitoring models and pipelines at scale, using AWS, SageMaker, Docker, MLflow and Airflow or equivalents. Preparation suggestion: explain how you would handle versioning, orchestration, deployment, monitoring and recovery without treating any named tool as mandatory for every component.

How would you investigate a drop in the usefulness of a deployed prediction model?

What to coverThe manager is accountable for the quality and operability of what the team ships. Preparation suggestion: trace the issue through data, pipeline execution, model behavior and scientist feedback, then distinguish a repair from a change that requires fresh experimental validation.

When would you build, adopt or fine-tune a foundation model?

What to coverThe role owns build-versus-adopt decisions, while foundation-model training and fine-tuning are listed as desirable experience. Preparation suggestion: compare task fit, available data, evaluation results, operational burden and scientific or business value before recommending an approach.

When would RAG help a scientific workflow, and how would you evaluate it?

What to coverDelivering applied AI solutions, including RAG, is part of the role. Preparation suggestion: identify a plausible information-retrieval need, compare RAG with a simpler search approach, and explain how you would test answer grounding and usefulness to scientists.

How would you decide whether a scientific workflow needs an AI agent?

What to coverThe team is building agentic systems, and the posting values judgment about where agentic workflows do and do not apply. Preparation suggestion: contrast an agent with a simpler workflow and discuss tool access, failure handling, human review and measurable outcomes; treat MCP-style integrations as optional, since they are preferred rather than required.

How would you set a modeling roadmap while balancing delivery and exploration?

What to coverThe manager owns the roadmap and must balance production-ready workflows with new modeling approaches. Preparation suggestion: describe how you would frame candidate problems, set evaluation and delivery gates, and decide when an experiment merits production investment.

Behavioural practice

Tell me about a time you developed an ML engineer while maintaining technical standards.

What to coverManaging and mentoring ML engineers is an explicit responsibility. Preparation suggestion: use a real situation, your coaching and standards-setting actions, and the resulting change in the engineer's work or growth.

Describe a time scientific and engineering partners understood a modeling problem differently.

What to coverThe role requires translating biological questions into ML framings across scientific and engineering groups. Preparation suggestion: give the situation, how you resolved assumptions or trade-offs with the partners, and the resulting decision or outcome.

Tell me about a focused contractor engagement you led.

What to coverThe manager oversees contractor engagements that deliver specific capabilities. Preparation suggestion: explain the situation, how you defined scope and reviewed the work, and the result, including how the team took ownership afterward.

Describe a time you influenced a technical decision beyond your own team.

What to coverThe posting calls for influencing decisions beyond the AI Team and representing it in leadership strategy discussions. Preparation suggestion: recount the situation, how you communicated evidence and trade-offs to different stakeholders, and what decision resulted.

Tell me about a time you took accountability for a production ML problem.

What to coverThe role is accountable for delivery, quality and operability while remaining hands-on where that has the greatest impact. Preparation suggestion: describe the situation, your own actions and how you supported the team, and the outcome and lessons learned.

02

Sharpen your knowledge

Topics to prepare

  • Model evaluation against biological outcomes

    The role defines evaluation and validation against experimental and field outcomes. Revise how to select baselines, avoid misleading validation splits, and interpret disagreement between model predictions and observed results; sketch an evaluation plan for a hypothetical crop-trait predictor.

  • Biological data and ML problem framing

    The roadmap serves genomic, phenotypic, and multi-omic predictions to scientists. Practice turning a hypothetical crop scientist’s trait question into a prediction target, available inputs, and success criteria. Familiarity with genomics, transcriptomics, and proteomics is preferred, not required.

  • Production ML architecture and operability

    The posting requires production models and pipelines at scale, with ownership of delivery, quality, and operability. Diagram a model’s path from training to deployment and monitoring, then identify likely failure points and how the team would detect them.

  • Foundation models, RAG, and agentic-system judgment

    Practical knowledge of these systems and decisions about building versus adopting them are required. Compare a hypothetical scientific information task with a prediction task; explain where RAG, an agent, a foundation model, or a simpler approach would fit—and where it would not.

  • Technical roadmap and team leadership

    The manager sets standards, mentors ML engineers, and balances production delivery with modeling exploration. Draft a short roadmap for two hypothetical modeling opportunities, stating priorities, evaluation gates, ownership, and what would trigger a change in direction.

Skills to revise

  • Train and deploy a neural-network example

    Using Python and PyTorch or TensorFlow, rehearse training a small model on synthetic data, recording evaluation results, and preparing it for deployment. This directly reflects the required hands-on neural-network and scientific-stack experience; the synthetic task is only a practice exercise.

  • Trace an ML pipeline through the named stack

    Outline or build a small practice pipeline covering a Docker container, AWS or SageMaker deployment, MLflow experiment tracking, and Airflow scheduling, using equivalents where appropriate. Show how a failed run or degraded model would be detected and addressed; deployment, maintenance, and monitoring at scale are explicit requirements.

  • Write a scientist-facing validation brief

    For a hypothetical trait-prediction model, produce a one-page brief defining the biological question, evaluation results, limitations, and what experimental or field evidence would be needed before acting. This practices the required translation between scientific partners and ML framing.

  • Prototype and assess a RAG or agentic workflow

    On a small, nonproprietary document set, sketch or implement retrieval and an agentic step, then test incorrect retrieval, unsupported answers, and failure handling. The posting calls for applied RAG and agentic systems; this prototype is a preparation suggestion, not a stated assignment.

  • Rehearse a cross-functional technical decision

    Prepare a five-minute explanation to scientists, engineers, and leaders of whether to build or adopt a hypothetical modeling capability, including quality criteria, operational trade-offs, and delivery priorities. This matches the role’s roadmap ownership, leadership discussions, and cross-functional communication.

04

Your preparation checklist

  • Map your evidence to the required qualifications

    Prepare a one-page reference to your education or equivalent experience, years in ML or AI roles, production models and pipelines, Python and neural-network work, and team leadership. Mark which examples you can substantiate; the posting requires these areas.

  • Rehearse a production ML project walkthrough

    Prepare one end-to-end example covering problem framing, your hands-on contribution, model training, deployment, monitoring, failures, and measured outcomes. Be ready to explain the tools you used and how they relate to PyTorch or TensorFlow, AWS, SageMaker, Docker, MLflow, and Airflow or equivalents named in the posting.

  • Sketch a predictive-design system

    As interview practice, draw a hypothetical system that turns genomic, phenotypic, and multi-omic data into predictions scientists can use. State assumptions, data and pipeline boundaries, serving choices, and how computational biologists, data engineers, software engineers, and crop scientists would contribute; do not present the sketch as Inari’s architecture.

  • Draft a model-validation plan

    Prepare a proposed evaluation approach that connects model metrics to experimental and field outcomes, addresses heterogeneous biological data, and explains when scientists should or should not trust a prediction. Label the approach as your proposal, not an existing Inari process.

  • Write a build-versus-adopt decision example

    Prepare a brief comparison for a possible foundation-model, RAG, or agentic use case: the scientific or business need, simpler alternatives, evaluation criteria, operational risks, and reasons to build, adopt, or decline it. The role explicitly calls for this judgment.

  • Prepare a leadership and roadmap story

    Select an example showing how you set technical standards, prioritized production delivery against exploration, mentored engineers, and influenced partners or leaders. If relevant, explain how you scoped and oversaw a focused contractor engagement while remaining hands-on.

  • Bring questions that test the role’s priorities

    Write questions about the first modeling priorities, how predictions are checked against experimental and field results, where agentic systems could help scientists, and how the AI Team works with biological and engineering partners. These are questions to ask, not assumptions about Inari’s current processes.

AI-generated from the job information · Prepared Sep 30, 2026 (UTC)Useful preparation, not a guarantee of eligibility or an offer.

Availability last checked: Nov 4, 2026. Status can change after a check; confirm on the employer’s website. Report an issue · Our checking policy

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